STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Map1bMicrotubule associated protein 1B. (236 aa)    
Predicted Functional Partners:
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.914
ENSODEP00000004861
annotation not available
    
 0.887
ENSODEP00000012762
annotation not available
    
 0.887
ENSODEP00000014293
annotation not available
    
 0.887
ENSODEP00000025933
annotation not available
    
 0.887
FMR1
FMRP translational regulator 1.
    
 
 0.878
FXR2
FMR1 autosomal homolog 2.
    
 
 0.858
RASSF1
Ras association domain family member 1.
    
 
 0.850
ENSODEP00000001258
annotation not available
    
 
 0.809
ENSODEP00000001355
annotation not available
    
 
 0.809
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.