STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC125Coiled-coil domain containing 125. (465 aa)    
Predicted Functional Partners:
ENSODEP00000011328
annotation not available
      
 0.555
ENSODEP00000012220
annotation not available
      
 0.547
CCDC92
Coiled-coil domain containing 92.
      
 0.540
CCDC113
Coiled-coil domain containing 113.
      
 0.537
POLR2B
RNA polymerase II subunit B.
      
 0.534
TACC1
Transforming acidic coiled-coil containing protein 1.
      
 0.533
ENSODEP00000007857
annotation not available
      
 0.506
RASL11B
RAS like family 11 member B.
      
 0.479
ENSODEP00000013817
annotation not available
      
 0.475
CCDC70
Coiled-coil domain containing 70.
      
 0.461
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.