STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR93WD repeat domain 93. (674 aa)    
Predicted Functional Partners:
ENSODEP00000009343
annotation not available
   
  
 0.542
NWD2
NACHT and WD repeat domain containing 2.
      
 0.526
PEX11A
Peroxisomal biogenesis factor 11 alpha.
      
 0.524
RIMS4
Regulating synaptic membrane exocytosis 4.
      
 0.479
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
      
 0.470
CWH43
Cell wall biogenesis 43 C-terminal homolog.
      
 0.463
DLGAP1
DLG associated protein 1.
     
 0.428
RAPGEF2
Rap guanine nucleotide exchange factor 2.
      
 0.412
NWD1
NACHT and WD repeat domain containing 1.
      
 0.412
PEX11B
Peroxisomal biogenesis factor 11 beta.
      
 0.410
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.