STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNHIT1Zinc finger HIT-type containing 1. (154 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
    
 0.998
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.996
EP400
E1A binding protein p400.
    
 0.995
ENSODEP00000014748
annotation not available
    
 0.995
ENSODEP00000019829
annotation not available
    
 0.995
ENSODEP00000025322
annotation not available
    
 0.995
LOC101574301
Actin-related protein 6.
   
 0.994
ENSODEP00000013350
annotation not available
   
 0.994
ENSODEP00000014390
annotation not available
   
 0.994
ENSODEP00000016929
annotation not available
    
 0.994
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.