STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000021819annotation not available (180 aa)    
Predicted Functional Partners:
REXO1
RNA exonuclease 1 homolog.
  
 0.928
REXO4
REX4 homolog, 3'-5' exonuclease.
  
 0.803
PAN2
poly(A) specific ribonuclease subunit PAN2.
  
 0.763
ISG20L2
Interferon stimulated exonuclease gene 20 like 2.
  
 0.739
ISG20
Interferon stimulated exonuclease gene 20.
  
 0.739
Aen
Apoptosis enhancing nuclease.
  
 0.739
TREX2
Three prime repair exonuclease 2.
  
 0.735
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
    0.582
EXOSC10
Exosome component 10.
   
 
 0.547
TRNT1
tRNA nucleotidyl transferase 1.
     
 0.544
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.