STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NaipNLR family apoptosis inhibitory protein. (1430 aa)    
Predicted Functional Partners:
NLRC4
NLR family CARD domain containing 4.
  
0.996
ENSODEP00000013817
annotation not available
    
 0.976
NLRP6
NLR family pyrin domain containing 6.
    
 0.976
TRADD
TNFRSF1A associated via death domain.
   
 0.975
ENSODEP00000022459
annotation not available
   
 0.975
INCENP
Inner centromere protein.
   
 0.971
CASP7
Caspase 7.
   
 0.966
XIAP
X-linked inhibitor of apoptosis.
    
0.963
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.960
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.957
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.