STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD9BTB domain containing 9. (392 aa)    
Predicted Functional Partners:
ENSODEP00000017298
annotation not available
    
 
 0.962
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.952
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.951
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.942
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.942
UBXN1
UBX domain protein 1.
    
   0.941
FAF1
Fas associated factor 1.
    
   0.941
DAP3
Death associated protein 3.
   
 
 0.938
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.938
MRPL32
Mitochondrial ribosomal protein L32.
   
 
 0.937
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.