STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC51BSolute carrier family 51 beta subunit. (130 aa)    
Predicted Functional Partners:
SLC51A
Solute carrier family 51 alpha subunit.
   
 
 0.924
TMEM184C
Transmembrane protein 184C.
     
 0.612
CYP7A1
Cytochrome P450 family 7 subfamily A member 1.
   
  
 0.601
FGF19
Fibroblast growth factor 19.
   
  
 0.582
SLC10A1
Solute carrier family 10 member 1.
   
  
 0.567
SLC10A2
Solute carrier family 10 member 2.
   
  
 0.565
TMEM184A
Transmembrane protein 184A.
     
 0.546
TMEM184B
Transmembrane protein 184B.
     
 0.546
NR1H4
Nuclear receptor subfamily 1 group H member 4.
   
  
 0.529
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
  
 0.524
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.