STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000022608annotation not available (499 aa)    
Predicted Functional Partners:
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
  
 0.999
WDR12
WD repeat domain 12.
   
 0.999
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.999
EBNA1BP2
EBNA1 binding protein 2.
   
 0.998
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.998
ENSODEP00000004680
annotation not available
  
 0.998
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.998
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.998
NSUN6
NOP2/Sun RNA methyltransferase 6.
  
 0.998
NOC3L
NOC3 like DNA replication regulator.
   
 0.998
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.