STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX1T-box transcription factor 1. (460 aa)    
Predicted Functional Partners:
HMX3
H6 family homeobox 3.
    
 
 0.876
RCHY1
Ring finger and CHY zinc finger domain containing 1.
   
    0.865
ENSODEP00000018156
annotation not available
   
  
 0.845
ENSODEP00000019575
annotation not available
   
  
 0.845
DR1
Down-regulator of transcription 1.
     
 0.843
ENSODEP00000012766
annotation not available
     
 0.718
ENSODEP00000015502
annotation not available
     
 0.718
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.700
JUP
Junction plakoglobin.
     
 0.696
UCK2
Uridine-cytidine kinase 2.
     
 0.642
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.