Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGO2 | CNOT1 | ENSODEP00000019172 | ENSODEP00000022255 | Argonaute RISC catalytic component 2. | CCR4-NOT transcription complex subunit 1. | 0.848 |
AGO2 | CNOT3 | ENSODEP00000019172 | ENSODEP00000000872 | Argonaute RISC catalytic component 2. | CCR4-NOT transcription complex subunit 3. | 0.408 |
AGO2 | DDX6 | ENSODEP00000019172 | ENSODEP00000010663 | Argonaute RISC catalytic component 2. | DEAD-box helicase 6. | 0.995 |
AGO2 | ENSODEP00000011860 | ENSODEP00000019172 | ENSODEP00000011860 | Argonaute RISC catalytic component 2. | annotation not available | 0.577 |
AGO2 | ZFP36 | ENSODEP00000019172 | ENSODEP00000022751 | Argonaute RISC catalytic component 2. | ZFP36 ring finger protein. | 0.954 |
CNOT1 | AGO2 | ENSODEP00000022255 | ENSODEP00000019172 | CCR4-NOT transcription complex subunit 1. | Argonaute RISC catalytic component 2. | 0.848 |
CNOT1 | CNOT3 | ENSODEP00000022255 | ENSODEP00000000872 | CCR4-NOT transcription complex subunit 1. | CCR4-NOT transcription complex subunit 3. | 0.998 |
CNOT1 | CNOT4 | ENSODEP00000022255 | ENSODEP00000017594 | CCR4-NOT transcription complex subunit 1. | CCR4-NOT transcription complex subunit 4. | 0.998 |
CNOT1 | DDX6 | ENSODEP00000022255 | ENSODEP00000010663 | CCR4-NOT transcription complex subunit 1. | DEAD-box helicase 6. | 0.988 |
CNOT1 | ENSODEP00000011860 | ENSODEP00000022255 | ENSODEP00000011860 | CCR4-NOT transcription complex subunit 1. | annotation not available | 0.628 |
CNOT1 | ZFP36 | ENSODEP00000022255 | ENSODEP00000022751 | CCR4-NOT transcription complex subunit 1. | ZFP36 ring finger protein. | 0.996 |
CNOT3 | AGO2 | ENSODEP00000000872 | ENSODEP00000019172 | CCR4-NOT transcription complex subunit 3. | Argonaute RISC catalytic component 2. | 0.408 |
CNOT3 | CNOT1 | ENSODEP00000000872 | ENSODEP00000022255 | CCR4-NOT transcription complex subunit 3. | CCR4-NOT transcription complex subunit 1. | 0.998 |
CNOT3 | CNOT4 | ENSODEP00000000872 | ENSODEP00000017594 | CCR4-NOT transcription complex subunit 3. | CCR4-NOT transcription complex subunit 4. | 0.997 |
CNOT3 | DDX6 | ENSODEP00000000872 | ENSODEP00000010663 | CCR4-NOT transcription complex subunit 3. | DEAD-box helicase 6. | 0.981 |
CNOT3 | ENSODEP00000011860 | ENSODEP00000000872 | ENSODEP00000011860 | CCR4-NOT transcription complex subunit 3. | annotation not available | 0.628 |
CNOT3 | ZFP36 | ENSODEP00000000872 | ENSODEP00000022751 | CCR4-NOT transcription complex subunit 3. | ZFP36 ring finger protein. | 0.949 |
CNOT4 | CNOT1 | ENSODEP00000017594 | ENSODEP00000022255 | CCR4-NOT transcription complex subunit 4. | CCR4-NOT transcription complex subunit 1. | 0.998 |
CNOT4 | CNOT3 | ENSODEP00000017594 | ENSODEP00000000872 | CCR4-NOT transcription complex subunit 4. | CCR4-NOT transcription complex subunit 3. | 0.997 |
CNOT4 | DDX6 | ENSODEP00000017594 | ENSODEP00000010663 | CCR4-NOT transcription complex subunit 4. | DEAD-box helicase 6. | 0.975 |
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