STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000023060annotation not available (457 aa)    
Predicted Functional Partners:
BSX
Brain specific homeobox.
    
 0.700
RUNX1
RUNX family transcription factor 1.
   
 0.636
RUNX3
RUNX family transcription factor 3.
   
 0.636
RUNX2
RUNX family transcription factor 2.
   
 0.636
TCF7L1
Transcription factor 7 like 1.
    
 0.606
LEF1
Lymphoid enhancer binding factor 1.
    
 0.606
ENSODEP00000015476
annotation not available
    
 0.606
TCF7
Transcription factor 7.
    
 0.606
IHH
Indian hedgehog signaling molecule.
     
 0.595
SERTAD4
SERTA domain containing 4.
    
 
 0.580
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.