STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRG4Proline rich and Gla domain 4. (225 aa)    
Predicted Functional Partners:
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.820
MKX
Mohawk homeobox.
      
 0.820
IRF6
Interferon regulatory factor 6.
      
 0.820
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.820
AP3B2
Adaptor related protein complex 3 subunit beta 2.
      
 0.820
BTBD1
BTB domain containing 1.
      
 0.820
ATRX
ATRX chromatin remodeler.
      
 0.819
SPPL2C
Signal peptide peptidase like 2C.
      
 0.740
NANOS1
Nanos C2HC-type zinc finger 1.
      
 0.730
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.715
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.