STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT3Synaptotagmin 3. (586 aa)    
Predicted Functional Partners:
SYT10
Synaptotagmin 10.
    
  
0.894
STON2
Stonin 2.
    
 0.842
TUBGCP2
Tubulin gamma complex associated protein 2.
    
 0.842
SYT6
Synaptotagmin 6.
    
  
0.830
EMC10
ER membrane protein complex subunit 10.
      
 0.820
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 
 0.820
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.756
ENSODEP00000010090
annotation not available
     
 0.754
ENSODEP00000010785
annotation not available
     
 0.754
SNAP25
Synaptosome associated protein 25.
    
 0.744
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.