STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAF6TNF receptor associated factor 6. (543 aa)    
Predicted Functional Partners:
CYLD
CYLD lysine 63 deubiquitinase.
    
 0.998
ENSODEP00000009949
annotation not available
    
 0.998
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
 0.998
MYD88
MYD88 innate immune signal transduction adaptor.
   
 0.998
TRAF5
TNF receptor associated factor 5.
   
0.998
TAB1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
   
 0.998
TLR4
Toll like receptor 4.
   
 0.997
TRAF3
TNF receptor associated factor 3.
   
0.996
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.996
IRAK1
Interleukin 1 receptor associated kinase 1.
   
 0.996
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.