STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000023320annotation not available (239 aa)    
Predicted Functional Partners:
HAUS3
HAUS augmin like complex subunit 3.
   
 0.997
ENSODEP00000002455
annotation not available
    
 0.994
HAUS7
HAUS augmin like complex subunit 7.
   
 0.994
RBM42
RNA binding motif protein 42.
   
 0.990
HAUS5
HAUS augmin like complex subunit 5.
   
 0.990
HAUS6
HAUS augmin like complex subunit 6.
    
 0.988
ENSODEP00000002207
annotation not available
    
 0.978
ENSODEP00000001581
annotation not available
    
 0.963
SNAP25
Synaptosome associated protein 25.
    
 0.963
SNAP29
Synaptosome associated protein 29.
    
 0.963
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.