STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000023398annotation not available (452 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
  
0.999
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.994
ZNHIT1
Zinc finger HIT-type containing 1.
    
 0.994
ACTR5
Actin related protein 5.
    
 0.994
PIH1D1
PIH1 domain containing 1.
   
 0.994
RPAP3
RNA polymerase II associated protein 3.
    
 0.993
EP400
E1A binding protein p400.
    
 0.993
ACTR8
Actin related protein 8.
   
 0.993
TTI1
TELO2 interacting protein 1.
    
 0.993
TRRAP
Transformation/transcription domain associated protein.
   
 0.992
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.