STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD16BTB domain containing 16. (521 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
  0.778
CUL1
Cullin 1.
    
  0.778
CACUL1
CDK2 associated cullin domain 1.
    
  0.778
PRKCQ
Protein kinase C theta.
      
 0.542
FYN
FYN proto-oncogene, Src family tyrosine kinase.
      
 0.535
ENSODEP00000005863
annotation not available
      
 0.497
ENSODEP00000000444
annotation not available
      
 0.477
CDX2
Caudal type homeobox 2.
      
 0.476
HDAC3
Histone deacetylase 3.
      
 0.432
ENSODEP00000017424
annotation not available
      
 0.426
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.