STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000023787annotation not available (233 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.994
UBXN6
UBX domain protein 6.
    
 0.992
SPATA5
Spermatogenesis associated 5.
   
 0.981
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.981
ENSODEP00000011964
annotation not available
    
 
0.975
ENSODEP00000012467
annotation not available
    
 
0.975
FAF1
Fas associated factor 1.
    
 0.972
ENSODEP00000017298
annotation not available
    
 
 0.971
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.970
UBXN8
UBX domain protein 8.
    
 0.961
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.