Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATP23 | OMA1 | ENSODEP00000002632 | ENSODEP00000016479 | ATP23 metallopeptidase and ATP synthase assembly factor homolog. | OMA1 zinc metallopeptidase. | 0.647 |
ATP23 | TMEM143 | ENSODEP00000002632 | ENSODEP00000024268 | ATP23 metallopeptidase and ATP synthase assembly factor homolog. | Transmembrane protein 143. | 0.449 |
EMP3 | TMEM143 | ENSODEP00000024277 | ENSODEP00000024268 | Epithelial membrane protein 3. | Transmembrane protein 143. | 0.405 |
ENSODEP00000023789 | TMEM143 | ENSODEP00000023789 | ENSODEP00000024268 | annotation not available | Transmembrane protein 143. | 0.479 |
OMA1 | ATP23 | ENSODEP00000016479 | ENSODEP00000002632 | OMA1 zinc metallopeptidase. | ATP23 metallopeptidase and ATP synthase assembly factor homolog. | 0.647 |
OMA1 | TMEM143 | ENSODEP00000016479 | ENSODEP00000024268 | OMA1 zinc metallopeptidase. | Transmembrane protein 143. | 0.400 |
TMEM143 | ATP23 | ENSODEP00000024268 | ENSODEP00000002632 | Transmembrane protein 143. | ATP23 metallopeptidase and ATP synthase assembly factor homolog. | 0.449 |
TMEM143 | EMP3 | ENSODEP00000024268 | ENSODEP00000024277 | Transmembrane protein 143. | Epithelial membrane protein 3. | 0.405 |
TMEM143 | ENSODEP00000023789 | ENSODEP00000024268 | ENSODEP00000023789 | Transmembrane protein 143. | annotation not available | 0.479 |
TMEM143 | OMA1 | ENSODEP00000024268 | ENSODEP00000016479 | Transmembrane protein 143. | OMA1 zinc metallopeptidase. | 0.400 |