STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000024339annotation not available (124 aa)    
Predicted Functional Partners:
ACTR5
Actin related protein 5.
    
 0.962
RUVBL1
RuvB like AAA ATPase 1.
    
 0.961
ENSODEP00000021777
annotation not available
    
 0.908
ENSODEP00000025209
annotation not available
    
 0.908
ENSODEP00000016929
annotation not available
    
 0.905
ENSODEP00000023398
annotation not available
    
 0.905
LOC101561105
annotation not available
    
 0.905
ACTR8
Actin related protein 8.
    
 0.871
CTSA
Cathepsin A.
     
 0.739
ENSODEP00000012794
annotation not available
     
 0.739
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.