EFEMP2 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

EFEMP2

EGF containing fibulin extracellular matrix protein 2. (443 aa)

Predicted Functional Partners:

MYSM1

0.951

ENSODEP00000025351

0.951

ARID4B

0.911

Arid4a

0.911

ENSODEP00000020185

0.911

LEO1

0.858

LOX

0.835

ENSODEP00000011039

0.830

LRGUK

0.819

PTK7

0.819

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4B	Arid4a	ENSODEP00000007199	ENSODEP00000019395	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.765
ARID4B	EFEMP2	ENSODEP00000007199	ENSODEP00000024359	AT-rich interaction domain 4B.	EGF containing fibulin extracellular matrix protein 2.	0.911
ARID4B	ENSODEP00000011039	ENSODEP00000007199	ENSODEP00000011039	AT-rich interaction domain 4B.	annotation not available	0.489
ARID4B	ENSODEP00000020185	ENSODEP00000007199	ENSODEP00000020185	AT-rich interaction domain 4B.	annotation not available	0.765
ARID4B	LOX	ENSODEP00000007199	ENSODEP00000011398	AT-rich interaction domain 4B.	Lysyl oxidase.	0.911
ARID4B	MYSM1	ENSODEP00000007199	ENSODEP00000015759	AT-rich interaction domain 4B.	Myb like, SWIRM and MPN domains 1.	0.984
Arid4a	ARID4B	ENSODEP00000019395	ENSODEP00000007199	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.765
Arid4a	EFEMP2	ENSODEP00000019395	ENSODEP00000024359	AT-rich interaction domain 4A.	EGF containing fibulin extracellular matrix protein 2.	0.911
Arid4a	ENSODEP00000011039	ENSODEP00000019395	ENSODEP00000011039	AT-rich interaction domain 4A.	annotation not available	0.489
Arid4a	ENSODEP00000020185	ENSODEP00000019395	ENSODEP00000020185	AT-rich interaction domain 4A.	annotation not available	0.975
Arid4a	LOX	ENSODEP00000019395	ENSODEP00000011398	AT-rich interaction domain 4A.	Lysyl oxidase.	0.911
Arid4a	MYSM1	ENSODEP00000019395	ENSODEP00000015759	AT-rich interaction domain 4A.	Myb like, SWIRM and MPN domains 1.	0.983
EFEMP2	ARID4B	ENSODEP00000024359	ENSODEP00000007199	EGF containing fibulin extracellular matrix protein 2.	AT-rich interaction domain 4B.	0.911
EFEMP2	Arid4a	ENSODEP00000024359	ENSODEP00000019395	EGF containing fibulin extracellular matrix protein 2.	AT-rich interaction domain 4A.	0.911
EFEMP2	ENSODEP00000011039	ENSODEP00000024359	ENSODEP00000011039	EGF containing fibulin extracellular matrix protein 2.	annotation not available	0.830
EFEMP2	ENSODEP00000020185	ENSODEP00000024359	ENSODEP00000020185	EGF containing fibulin extracellular matrix protein 2.	annotation not available	0.911
EFEMP2	ENSODEP00000025351	ENSODEP00000024359	ENSODEP00000025351	EGF containing fibulin extracellular matrix protein 2.	annotation not available	0.951
EFEMP2	LEO1	ENSODEP00000024359	ENSODEP00000010859	EGF containing fibulin extracellular matrix protein 2.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.858
EFEMP2	LOX	ENSODEP00000024359	ENSODEP00000011398	EGF containing fibulin extracellular matrix protein 2.	Lysyl oxidase.	0.835
EFEMP2	LRGUK	ENSODEP00000024359	ENSODEP00000011659	EGF containing fibulin extracellular matrix protein 2.	Leucine rich repeats and guanylate kinase domain containing.	0.819