STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000024466annotation not available (166 aa)    
Predicted Functional Partners:
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.987
TP53I13
Tumor protein p53 inducible protein 13.
   
 
 0.985
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.985
MRPL12
Mitochondrial ribosomal protein L12.
   
 
 0.984
MRPS12
Mitochondrial ribosomal protein S12.
   
 
 0.984
ENSODEP00000025023
annotation not available
   
 
 0.984
DAP3
Death associated protein 3.
   
 
 0.983
MRPL10
Mitochondrial ribosomal protein L10.
   
   0.982
MRPL27
Mitochondrial ribosomal protein L27.
   
   0.981
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.979
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.