STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR11WD repeat domain 11. (1222 aa)    
Predicted Functional Partners:
C17orf75
Chromosome 17 open reading frame 75.
    
 
 0.931
NAA40
N(alpha)-acetyltransferase 40, NatD catalytic subunit.
    
   0.914
ENSODEP00000017298
annotation not available
   
   0.876
TRAPPC11
Trafficking protein particle complex 11.
   
    0.870
ENSODEP00000013927
annotation not available
    
 
 0.854
FAM91A1
Family with sequence similarity 91 member A1.
     
 0.813
XPOT
Exportin for tRNA.
    
   0.800
RHOH
Ras homolog family member H.
    
  0.681
STOM
Stomatin.
    
  0.679
STOML3
Stomatin like 3.
    
  0.679
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.