STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ice1Interactor of little elongation complex ELL subunit 1. (232 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.951
ENSODEP00000025351
annotation not available
   
 0.951
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
  0.932
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.927
AFF1
AF4/FMR2 family member 1.
    
  0.923
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
  0.923
AFF4
AF4/FMR2 family member 4.
    
  0.923
ELP2
Elongator acetyltransferase complex subunit 2.
    
  0.923
NUFIP1
Nuclear FMR1 interacting protein 1.
    
  0.921
CDC73
Cell division cycle 73.
    
  0.917
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.