ENSODEP00000025039 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSODEP00000025039

annotation not available (102 aa)

Predicted Functional Partners:

EPRS1

0.555

ENSODEP00000003494

0.531

DAPK1

0.527

ENSODEP00000024808

0.523

CASP8

0.478

DUSP14

0.442

DAP3

0.408

ATRX

0.406

ENSODEP00000010825

0.406

ENSODEP00000016561

0.406

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATRX	ENSODEP00000025039	ENSODEP00000001347	ENSODEP00000025039	ATRX chromatin remodeler.	annotation not available	0.406
CASP8	ENSODEP00000025039	ENSODEP00000012216	ENSODEP00000025039	Caspase 8.	annotation not available	0.478
DAP3	ENSODEP00000025039	ENSODEP00000014427	ENSODEP00000025039	Death associated protein 3.	annotation not available	0.408
DAPK1	ENSODEP00000025039	ENSODEP00000006777	ENSODEP00000025039	Death associated protein kinase 1.	annotation not available	0.527
DUSP14	ENSODEP00000025039	ENSODEP00000026606	ENSODEP00000025039	Dual specificity phosphatase 14.	annotation not available	0.442
ENSODEP00000003494	ENSODEP00000025039	ENSODEP00000003494	ENSODEP00000025039	annotation not available	annotation not available	0.531
ENSODEP00000010825	ENSODEP00000025039	ENSODEP00000010825	ENSODEP00000025039	annotation not available	annotation not available	0.406
ENSODEP00000016561	ENSODEP00000025039	ENSODEP00000016561	ENSODEP00000025039	annotation not available	annotation not available	0.406
ENSODEP00000024808	ENSODEP00000025039	ENSODEP00000024808	ENSODEP00000025039	annotation not available	annotation not available	0.523
ENSODEP00000025039	ATRX	ENSODEP00000025039	ENSODEP00000001347	annotation not available	ATRX chromatin remodeler.	0.406
ENSODEP00000025039	CASP8	ENSODEP00000025039	ENSODEP00000012216	annotation not available	Caspase 8.	0.478
ENSODEP00000025039	DAP3	ENSODEP00000025039	ENSODEP00000014427	annotation not available	Death associated protein 3.	0.408
ENSODEP00000025039	DAPK1	ENSODEP00000025039	ENSODEP00000006777	annotation not available	Death associated protein kinase 1.	0.527
ENSODEP00000025039	DUSP14	ENSODEP00000025039	ENSODEP00000026606	annotation not available	Dual specificity phosphatase 14.	0.442
ENSODEP00000025039	ENSODEP00000003494	ENSODEP00000025039	ENSODEP00000003494	annotation not available	annotation not available	0.531
ENSODEP00000025039	ENSODEP00000010825	ENSODEP00000025039	ENSODEP00000010825	annotation not available	annotation not available	0.406
ENSODEP00000025039	ENSODEP00000016561	ENSODEP00000025039	ENSODEP00000016561	annotation not available	annotation not available	0.406
ENSODEP00000025039	ENSODEP00000024808	ENSODEP00000025039	ENSODEP00000024808	annotation not available	annotation not available	0.523
ENSODEP00000025039	EPRS1	ENSODEP00000025039	ENSODEP00000020284	annotation not available	glutamyl-prolyl-tRNA synthetase 1.	0.555
EPRS1	ENSODEP00000025039	ENSODEP00000020284	ENSODEP00000025039	glutamyl-prolyl-tRNA synthetase 1.	annotation not available	0.555