STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000025318annotation not available (418 aa)    
Predicted Functional Partners:
ENSODEP00000018086
annotation not available
    
 0.975
ENSODEP00000018741
annotation not available
    
 0.975
ENSODEP00000020684
annotation not available
    
 0.975
ENSODEP00000020799
annotation not available
    
 0.975
ENSODEP00000026427
annotation not available
    
 0.975
ENSODEP00000026737
annotation not available
    
 0.975
ENSODEP00000018031
annotation not available
    
 0.973
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.966
ENSODEP00000003530
annotation not available
   
 0.962
ENSODEP00000005375
annotation not available
   
 0.962
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.