STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000025339annotation not available (152 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.991
ENSODEP00000004733
annotation not available
   
 0.989
ENSODEP00000011413
annotation not available
   
 0.989
ENSODEP00000026050
annotation not available
   
 0.989
TRAF6
TNF receptor associated factor 6.
    
 0.979
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
   
 0.974
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.971
HLTF
Helicase like transcription factor.
    
 0.962
LOC101588609
annotation not available
   
 0.961
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.961
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.