STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNASE4Ribonuclease A family member 4. (145 aa)    
Predicted Functional Partners:
RNH1
Ribonuclease/angiogenin inhibitor 1.
    
 
 0.925
NLRP14
NLR family pyrin domain containing 14.
    
 
 0.831
NLRP3
NLR family pyrin domain containing 3.
    
 
 0.831
TRIM14
Tripartite motif containing 14.
    
   0.806
NLRC3
NLR family CARD domain containing 3.
    
   0.806
NLRC5
NLR family CARD domain containing 5.
    
   0.791
NOD2
Nucleotide binding oligomerization domain containing 2.
    
   0.765
NOD1
Nucleotide binding oligomerization domain containing 1.
    
   0.765
ENSODEP00000022692
annotation not available
    
   0.765
ENSODEP00000023419
annotation not available
    
   0.765
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.