STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000025741annotation not available (171 aa)    
Predicted Functional Partners:
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.986
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
    
 0.981
NUP153
Nucleoporin 153.
    
 0.969
ENSODEP00000010363
annotation not available
    
 0.967
ENSODEP00000017492
annotation not available
    
 0.967
SAC3D1
SAC3 domain containing 1.
    
 0.963
Eny2
annotation not available
   
 0.961
ENSODEP00000009401
annotation not available
   
 0.961
ENSODEP00000020308
annotation not available
   
 0.961
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.944
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.