STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAL2TAL bHLH transcription factor 2. (109 aa)    
Predicted Functional Partners:
TCF3
Transcription factor 3.
    
 0.877
LDB1
LIM domain binding 1.
    
 0.851
LDB2
LIM domain binding 2.
    
 0.838
ENSODEP00000000026
annotation not available
    
 0.832
ENSODEP00000023520
annotation not available
    
 0.832
ENSODEP00000023602
annotation not available
    
 0.832
TCF4
Transcription factor 4.
    
 0.832
LMO2
LIM domain only 2.
    
 0.808
HELT
Helt bHLH transcription factor.
   
 
 0.726
LMO1
LIM domain only 1.
    
 0.716
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.