STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRSS23Serine protease 23. (383 aa)    
Predicted Functional Partners:
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.710
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
     
 0.664
ENSODEP00000011272
annotation not available
     
 0.595
COL6A2
Collagen type VI alpha 2 chain.
   
 
 0.592
NOX3
NADPH oxidase 3.
      
 0.555
EFEMP2
EGF containing fibulin extracellular matrix protein 2.
   
  
 0.551
POSTN
Periostin.
   
  
 0.549
VGLL3
Vestigial like family member 3.
   
  
 0.548
PRRX2
Paired related homeobox 2.
   
  
 0.546
FKBP10
FKBP prolyl isomerase 10.
   
  
 0.537
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.