STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000025859annotation not available (85 aa)    
Predicted Functional Partners:
UBA5
Ubiquitin like modifier activating enzyme 5.
    
 
 0.933
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
   
 
 0.897
ENSODEP00000005987
annotation not available
    
 
 0.879
ENSODEP00000016169
annotation not available
    
 
 0.879
MOCS3
Molybdenum cofactor synthesis 3.
    
 
 0.660
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 
 0.622
UBA1
Ubiquitin like modifier activating enzyme 1.
   
 
 0.622
UBA7
Ubiquitin like modifier activating enzyme 7.
   
 
 0.622
UFL1
UFM1 specific ligase 1.
   
 
 0.616
ENSODEP00000020743
annotation not available
    
 
 0.602
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.