STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000025966annotation not available (364 aa)    
Predicted Functional Partners:
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
     
 0.893
MOCOS
Molybdenum cofactor sulfurase.
    
 0.842
SCLY
Selenocysteine lyase.
    
 0.838
TXNRD2
Thioredoxin reductase 2.
  
 
 0.813
TXNRD3
Thioredoxin reductase 3.
  
 
 0.799
TXNRD1
Thioredoxin reductase 1.
  
 
 0.799
ENSODEP00000017719
annotation not available
    
 0.786
ENSODEP00000001672
annotation not available
    
 0.724
ENSODEP00000011963
annotation not available
    
 0.724
ENSODEP00000014778
annotation not available
    
 0.724
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.