STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000026198annotation not available (126 aa)    
Predicted Functional Partners:
MACROH2A1
Core histone macro-H2A.1.
   
 0.970
MACROH2A2
macroH2A.2 histone.
   
 0.970
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.968
ENSODEP00000024668
annotation not available
 
 0.958
ENSODEP00000026098
annotation not available
 
 0.957
H2AC12
H2A clustered histone 12.
 
 0.957
H2AC21
H2A clustered histone 21.
 
 0.957
ENSODEP00000026531
annotation not available
 
 0.957
H2AC1
H2A clustered histone 1.
 
 0.957
ENSODEP00000015307
annotation not available
    
 0.956
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.