STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000026212annotation not available (51 aa)    
Predicted Functional Partners:
MARS1
methionyl-tRNA synthetase 1.
  
 0.994
ENSODEP00000018854
annotation not available
   
 0.993
ENSODEP00000021380
annotation not available
   
 0.993
Fau
annotation not available
   
 0.993
ENSODEP00000000099
annotation not available
   
 0.990
YARS1
tyrosyl-tRNA synthetase 1.
  
 0.983
ENSODEP00000016525
annotation not available
  
 0.981
ENSODEP00000025735
annotation not available
  
 0.981
RPS12
Ribosomal protein S12.
  
  0.969
ENSODEP00000009303
annotation not available
  
  0.969
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.