STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACKR3Atypical chemokine receptor 3. (362 aa)    
Predicted Functional Partners:
CXCL12
C-X-C motif chemokine ligand 12.
    
 0.996
Cxcr4
annotation not available
    
0.987
LOC101565607
annotation not available
    
0.987
ENSODEP00000010003
annotation not available
    
 0.958
ARRB2
Arrestin beta 2.
    
 0.958
ARRB1
Arrestin beta 1.
    
 0.915
ATP5F1A
ATP synthase F1 subunit alpha.
    
  0.909
ENSODEP00000004232
annotation not available
    
   0.906
ARR3
Arrestin 3.
    
 0.888
SAG
S-antigen visual arrestin.
    
 0.875
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.