STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000026709annotation not available (322 aa)    
Predicted Functional Partners:
ENSODEP00000019109
annotation not available
 
     0.916
RAB35
RAB35, member RAS oncogene family.
    
 0.839
IFT27
Intraflagellar transport 27.
    
 0.797
ARF6
ADP ribosylation factor 6.
    
 
 0.615
ENSODEP00000004687
annotation not available
    
 
 0.474
Arl15
ADP ribosylation factor like GTPase 15.
    
 
 0.474
CDC16
Cell division cycle 16.
      
 0.471
TBC1D13
TBC1 domain family member 13.
      
 0.461
KIDINS220
Kinase D interacting substrate 220.
    
 
 0.455
ATP6V1B1
ATPase H+ transporting V1 subunit B1.
    
 0.426
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.