STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINGO3Leucine rich repeat and Ig domain containing 3. (592 aa)    
Predicted Functional Partners:
NTNG1
Netrin G1.
    
 0.965
NTNG2
Netrin G2.
   
 0.949
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 0.925
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 0.925
ADGRL1
Adhesion G protein-coupled receptor L1.
    
 0.925
CWC25
CWC25 spliceosome associated protein homolog.
   
 
 0.909
UGT3A2
UDP glycosyltransferase family 3 member A2.
   
  
 0.870
FAM151B
Family with sequence similarity 151 member B.
    
 
 0.860
ENSODEP00000000054
annotation not available
   
    0.854
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.854
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.