STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR1A5-hydroxytryptamine receptor 1A. (421 aa)    
Predicted Functional Partners:
GNG2
G protein subunit gamma 2.
    
 0.974
GNG4
G protein subunit gamma 4.
    
 0.960
GNB3
G protein subunit beta 3.
    
 0.952
HTR2A
5-hydroxytryptamine receptor 2A.
    
0.952
HTR2C
5-hydroxytryptamine receptor 2C.
   
0.952
GNB4
G protein subunit beta 4.
    
  0.951
ENSODEP00000005855
annotation not available
    
 0.949
GNAI1
G protein subunit alpha i1.
    
 0.949
GNB2
G protein subunit beta 2.
    
  0.949
ENSODEP00000025889
annotation not available
    
 0.949
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.