STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000026983annotation not available (299 aa)    
Predicted Functional Partners:
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.972
FDPS
Farnesyl diphosphate synthase.
    
 0.967
IDI1
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.952
MVD
Mevalonate diphosphate decarboxylase.
  
 0.942
DHDDS
Dehydrodolichyl diphosphate synthase subunit.
  
 
 0.933
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 0.931
ENSODEP00000014618
annotation not available
    
 0.925
FBXO30
F-box protein 30.
    
 0.918
LSS
Lanosterol synthase.
  
 
 0.910
COQ2
Coenzyme Q2, polyprenyltransferase.
  
 
 0.904
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.