STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000027019annotation not available (110 aa)    
Predicted Functional Partners:
ENSODEP00000018854
annotation not available
   
 0.997
ENSODEP00000021380
annotation not available
   
 0.997
Fau
annotation not available
   
 0.997
ENSODEP00000000099
annotation not available
   
 0.995
ENSODEP00000009779
annotation not available
   
 
 0.988
ENSODEP00000007747
annotation not available
   
 0.985
RPL27
Ribosomal protein L27.
   
 0.985
ENSODEP00000025678
annotation not available
   
 0.985
ENSODEP00000026096
annotation not available
   
 0.985
RPS12
Ribosomal protein S12.
   
 0.984
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.