STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV11_05054SH3 domain-containing protein. (226 aa)    
Predicted Functional Partners:
PV11_00829
Uncharacterized protein.
    
 0.940
PV11_10214
Uncharacterized protein.
   
 0.882
PV11_07923
Uncharacterized protein.
   
 0.882
PV11_03238
Uncharacterized protein.
   
 0.882
PV11_05476
Uncharacterized protein.
    
 0.798
PV11_04274
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.
    
 0.768
PV11_05783
Uncharacterized protein.
    
 0.768
PV11_04740
Uncharacterized protein.
    
 0.768
PV11_05058
DUF2013 domain-containing protein.
    
 0.748
PV11_05153
Uncharacterized protein.
    
 0.736
Your Current Organism:
Exophiala sideris
NCBI taxonomy Id: 1016849
Other names: CBS 121818, E. sideris, Exophiala sideris Seyedmousavi & de Hoog 2011, Exophiala sp. CBS 127096, Exophiala sp. SST-2011, dH 18174
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.