STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR08325.1FAD/FMN-containing dehydrogenase. (477 aa)    
Predicted Functional Partners:
SIR06250.1
Glycolate oxidase iron-sulfur subunit.
 
 0.907
SIR08401.1
Creatinine amidohydrolase.
     0.905
SIQ96030.1
Glutamate synthase (NADPH) large subunit.
    
 0.819
SIR08515.1
Cytosine deaminase.
 
     0.810
SIR08358.1
NitT/TauT family transport system substrate-binding protein.
 
     0.807
SIQ12570.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.767
SIR08475.1
Cytosine deaminase.
 
     0.755
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.741
SIP93808.1
CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.733
SIQ94720.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.714
Your Current Organism:
Domibacillus enclensis
NCBI taxonomy Id: 1017273
Other names: CCTCC AB 2011121, D. enclensis, DSM 25145, Domibacillus enclensis Sonalkar et al. 2014, NCIM 5462
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