Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arl14ep | Atf7ip | G5C6P2 | G5BBH3 | ARF7EP_C domain-containing protein. | Activating transcription factor 7-interacting protein 1. | 0.853 |
Arl14ep | GW7_15848 | G5C6P2 | G5BWF9 | ARF7EP_C domain-containing protein. | Activating transcription factor 7-interacting protein 2. | 0.693 |
Arl14ep | Setdb1 | G5C6P2 | G5AJY0 | ARF7EP_C domain-containing protein. | Histone-lysine N-methyltransferase SETDB1. | 0.854 |
Arl14epl | Atf7ip | G5BJS9 | G5BBH3 | ARF7EP_C domain-containing protein. | Activating transcription factor 7-interacting protein 1. | 0.755 |
Arl14epl | GW7_15848 | G5BJS9 | G5BWF9 | ARF7EP_C domain-containing protein. | Activating transcription factor 7-interacting protein 2. | 0.693 |
Arl14epl | Setdb1 | G5BJS9 | G5AJY0 | ARF7EP_C domain-containing protein. | Histone-lysine N-methyltransferase SETDB1. | 0.713 |
Atf7ip | Arl14ep | G5BBH3 | G5C6P2 | Activating transcription factor 7-interacting protein 1. | ARF7EP_C domain-containing protein. | 0.853 |
Atf7ip | Arl14epl | G5BBH3 | G5BJS9 | Activating transcription factor 7-interacting protein 1. | ARF7EP_C domain-containing protein. | 0.755 |
Atf7ip | Setdb1 | G5BBH3 | G5AJY0 | Activating transcription factor 7-interacting protein 1. | Histone-lysine N-methyltransferase SETDB1. | 0.964 |
Camkmt | Setdb1 | G5C9U2 | G5AJY0 | Uncharacterized protein. | Histone-lysine N-methyltransferase SETDB1. | 0.920 |
Cbx5 | Dnmt1 | G5BID8 | G5B344 | Chromobox protein-like protein 5. | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.518 |
Cbx5 | Dnmt3a | G5BID8 | G5CBL5 | Chromobox protein-like protein 5. | DNA (Cytosine-5)-methyltransferase 3A; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.508 |
Cbx5 | Dnmt3b | G5BID8 | G5BPS8 | Chromobox protein-like protein 5. | DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.647 |
Cbx5 | Setdb1 | G5BID8 | G5AJY0 | Chromobox protein-like protein 5. | Histone-lysine N-methyltransferase SETDB1. | 0.740 |
Dnmt1 | Cbx5 | G5B344 | G5BID8 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Chromobox protein-like protein 5. | 0.518 |
Dnmt1 | Dnmt3a | G5B344 | G5CBL5 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | DNA (Cytosine-5)-methyltransferase 3A; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.990 |
Dnmt1 | Dnmt3b | G5B344 | G5BPS8 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.997 |
Dnmt1 | Setdb1 | G5B344 | G5AJY0 | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Histone-lysine N-methyltransferase SETDB1. | 0.715 |
Dnmt3a | Cbx5 | G5CBL5 | G5BID8 | DNA (Cytosine-5)-methyltransferase 3A; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Chromobox protein-like protein 5. | 0.508 |
Dnmt3a | Dnmt1 | G5CBL5 | G5B344 | DNA (Cytosine-5)-methyltransferase 3A; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.990 |
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