STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmg20bHigh mobility group 20B. (328 aa)    
Predicted Functional Partners:
GW7_07504
Lysine-specific histone demethylase 1.
   
 0.976
Phf21a
PHD finger protein 21A.
    
 0.960
Rcor2
REST corepressor 2.
   
 0.930
GW7_02932
REST corepressor 3.
   
 0.831
GW7_09397
REST corepressor 3.
   
 0.831
Gse1
Genetic suppressor element 1.
   
 0.822
GW7_08524
Histone deacetylase 2.
   
 0.762
GW7_16999
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.762
GW7_12761
Histone deacetylase 2.
   
 0.762
GW7_19065
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.712
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.