STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcolce2Procollagen C-endopeptidase enhancer 2. (414 aa)    
Predicted Functional Partners:
Col9a3
Collagen alpha-3(IX) chain.
   
 0.688
Gc
Vitamin D-binding protein.
    
 0.558
GW7_01021
Collagen alpha-1(XXVII) chain.
   
 0.544
Col22a1
Collagen alpha-1(XXII) chain.
    
 0.538
Met
Hepatocyte growth factor receptor.
    
 0.526
GW7_19934
Macrophage-stimulating protein receptor.
    
 0.526
Col1a1
Collagen alpha-1(I) chain.
   
 0.519
Col23a1
Collagen alpha-1(XXIII) chain.
   
 0.502
Col1a2
Collagen alpha-2(I) chain.
   
 0.501
Col8a2
Collagen alpha-2(VIII) chain.
   
 0.500
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.