STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc25a38Solute carrier family 25 member 38; Belongs to the mitochondrial carrier (TC 2.A.29) family. (284 aa)    
Predicted Functional Partners:
Ppox
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
      
 0.636
UROS
Uroporphyrinogen-III synthase.
   
  
 0.607
Glrx5
Glutaredoxin-related protein 5.
      
 0.586
Slc25a26
S-adenosylmethionine mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.559
GW7_16028
Coiled-coil domain-containing protein 105.
      
 0.556
ABCB6
ATP-binding cassette sub-family B member 6, mitochondrial.
      
 0.552
Urod
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
      
 0.543
Abcb7
ATP-binding cassette sub-family B member 7, mitochondrial.
      
 0.543
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
    
 
 0.492
ALAS2
5-aminolevulinate synthase.
      
 0.481
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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