STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_02812BRCA2 and CDKN1A-interacting protein. (238 aa)    
Predicted Functional Partners:
RPL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.810
Mrto4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.682
Suox
Sulfite oxidase, mitochondrial.
      
 0.681
IMP4
U3 small nucleolar ribonucleoprotein IMP4.
   
    0.665
RPF2
Ribosome production factor 2 homolog.
   
  
 0.655
GW7_00196
Brix domain-containing protein 1.
   
  
 0.655
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.636
GW7_11935
Brix domain-containing protein 2.
   
    0.623
Brix1
Brix domain-containing protein 2.
   
    0.623
GW7_11308
Programmed cell death protein 2.
   
  
 0.612
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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