Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Alyref | EIF4A3 | G5BJ79 | G5AKN8 | THO complex subunit 4. | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | 0.997 |
Alyref | Epn1 | G5BJ79 | G5BVY1 | THO complex subunit 4. | Splicing factor U2AF 65 kDa subunit. | 0.904 |
Alyref | GW7_01199 | G5BJ79 | G5ATE3 | THO complex subunit 4. | Splicing factor, arginine/serine-rich 3. | 0.806 |
Alyref | GW7_12840 | G5BJ79 | G5B361 | THO complex subunit 4. | Splicing factor, arginine/serine-rich 9. | 0.628 |
Alyref | GW7_18782 | G5BJ79 | G5BM60 | THO complex subunit 4. | Uncharacterized protein. | 0.668 |
Alyref | MAGOHB | G5BJ79 | G5BE03 | THO complex subunit 4. | Protein mago nashi homolog 2. | 0.905 |
Alyref | Magoh | G5BJ79 | G5C9K8 | THO complex subunit 4. | Mago nashi-like protein. | 0.905 |
Alyref | Rbm8a | G5BJ79 | G5BBN0 | THO complex subunit 4. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.959 |
Alyref | Srsf1 | G5BJ79 | G5C421 | THO complex subunit 4. | Splicing factor, arginine/serine-rich 1. | 0.910 |
Alyref | Srsf7 | G5BJ79 | G5CA70 | THO complex subunit 4. | Splicing factor, arginine/serine-rich 7. | 0.668 |
EIF4A3 | Alyref | G5AKN8 | G5BJ79 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | THO complex subunit 4. | 0.997 |
EIF4A3 | Epn1 | G5AKN8 | G5BVY1 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Splicing factor U2AF 65 kDa subunit. | 0.776 |
EIF4A3 | GW7_01199 | G5AKN8 | G5ATE3 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Splicing factor, arginine/serine-rich 3. | 0.919 |
EIF4A3 | GW7_12840 | G5AKN8 | G5B361 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Splicing factor, arginine/serine-rich 9. | 0.818 |
EIF4A3 | GW7_18782 | G5AKN8 | G5BM60 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.704 |
EIF4A3 | MAGOHB | G5AKN8 | G5BE03 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Protein mago nashi homolog 2. | 0.979 |
EIF4A3 | Magoh | G5AKN8 | G5C9K8 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Mago nashi-like protein. | 0.985 |
EIF4A3 | Rbm8a | G5AKN8 | G5BBN0 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.999 |
EIF4A3 | Srsf1 | G5AKN8 | G5C421 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Splicing factor, arginine/serine-rich 1. | 0.982 |
EIF4A3 | Srsf7 | G5AKN8 | G5CA70 | Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. | Splicing factor, arginine/serine-rich 7. | 0.704 |
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